Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnf4aP49698 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.26■□□□□ 0.51
Hnf4aP49698 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnf4aP49698 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Hnf4aP49698 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnf4aP49698 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hnf4aP49698 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.26■□□□□ 0.51
Hnf4aP49698 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hnf4aP49698 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hnf4aP49698 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hnf4aP49698 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.26■□□□□ 0.51
Hnf4aP49698 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hnf4aP49698 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.25■□□□□ 0.51
Hnf4aP49698 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.25■□□□□ 0.51
Hnf4aP49698 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Hnf4aP49698 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Hnf4aP49698 Gm43060-201ENSMUST00000200621 289 ntBASIC18.25■□□□□ 0.51
Hnf4aP49698 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnf4aP49698 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.24■□□□□ 0.51
Hnf4aP49698 Gm7860-201ENSMUST00000121190 879 ntBASIC18.24■□□□□ 0.51
Hnf4aP49698 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.24■□□□□ 0.51
Hnf4aP49698 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Hnf4aP49698 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnf4aP49698 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.24■□□□□ 0.51
Hnf4aP49698 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnf4aP49698 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnf4aP49698 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.23■□□□□ 0.51
Hnf4aP49698 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hnf4aP49698 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.23■□□□□ 0.51
Hnf4aP49698 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.23■□□□□ 0.51
Hnf4aP49698 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnf4aP49698 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Hnf4aP49698 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hnf4aP49698 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hnf4aP49698 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.22■□□□□ 0.51
Hnf4aP49698 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hnf4aP49698 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.22■□□□□ 0.51
Hnf4aP49698 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.22■□□□□ 0.51
Hnf4aP49698 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Hnf4aP49698 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hnf4aP49698 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Hnf4aP49698 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.21■□□□□ 0.51
Hnf4aP49698 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.21■□□□□ 0.51
Hnf4aP49698 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.21■□□□□ 0.51
Hnf4aP49698 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hnf4aP49698 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hnf4aP49698 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hnf4aP49698 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hnf4aP49698 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Hnf4aP49698 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.2■□□□□ 0.5
Hnf4aP49698 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hnf4aP49698 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms