Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc1P35601 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.85■□□□□ 0.77
Rfc1P35601 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc1P35601 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rfc1P35601 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rfc1P35601 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rfc1P35601 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfc1P35601 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc1P35601 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc1P35601 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rfc1P35601 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfc1P35601 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Mir6236-201ENSMUST00000184437 123 ntBASIC19.84■□□□□ 0.77
Rfc1P35601 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.84■□□□□ 0.77
Rfc1P35601 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rfc1P35601 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfc1P35601 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.84■□□□□ 0.77
Rfc1P35601 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rfc1P35601 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfc1P35601 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Rfc1P35601 Gm7417-201ENSMUST00000192950 473 ntBASIC19.83■□□□□ 0.77
Rfc1P35601 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rfc1P35601 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Rfc1P35601 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc1P35601 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc1P35601 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc1P35601 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Rfc1P35601 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rfc1P35601 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc1P35601 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc1P35601 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfc1P35601 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.82■□□□□ 0.76
Rfc1P35601 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rfc1P35601 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.82■□□□□ 0.76
Rfc1P35601 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rfc1P35601 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rfc1P35601 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rfc1P35601 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.82■□□□□ 0.76
Rfc1P35601 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc1P35601 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rfc1P35601 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Gm9959-201ENSMUST00000068277 390 ntBASIC19.81■□□□□ 0.76
Rfc1P35601 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rfc1P35601 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc1P35601 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc1P35601 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc1P35601 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.8■□□□□ 0.76
Rfc1P35601 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc1P35601 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc1P35601 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc1P35601 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rfc1P35601 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.8■□□□□ 0.76
Rfc1P35601 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rfc1P35601 Etf1-202ENSMUST00000180351 108 ntBASIC19.8■□□□□ 0.76
Rfc1P35601 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc1P35601 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.8■□□□□ 0.76
Rfc1P35601 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.8■□□□□ 0.76
Rfc1P35601 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Rfc1P35601 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Rfc1P35601 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.8■□□□□ 0.76
Rfc1P35601 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc1P35601 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.79■□□□□ 0.76
Rfc1P35601 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc1P35601 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc1P35601 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms