Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Foxa1P35582 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Foxa1P35582 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.45■□□□□ 0.38
Foxa1P35582 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.45■□□□□ 0.38
Foxa1P35582 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.45■□□□□ 0.38
Foxa1P35582 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
Foxa1P35582 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Foxa1P35582 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxa1P35582 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Foxa1P35582 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.44■□□□□ 0.38
Foxa1P35582 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Foxa1P35582 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Foxa1P35582 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.44■□□□□ 0.38
Foxa1P35582 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Foxa1P35582 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxa1P35582 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Foxa1P35582 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Foxa1P35582 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxa1P35582 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.42■□□□□ 0.38
Foxa1P35582 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Gm26571-201ENSMUST00000181399 666 ntBASIC17.42■□□□□ 0.38
Foxa1P35582 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.42■□□□□ 0.38
Foxa1P35582 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Foxa1P35582 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Foxa1P35582 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.41■□□□□ 0.38
Foxa1P35582 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.41■□□□□ 0.38
Foxa1P35582 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Foxa1P35582 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Foxa1P35582 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.41■□□□□ 0.38
Foxa1P35582 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Foxa1P35582 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Foxa1P35582 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.4■□□□□ 0.38
Foxa1P35582 AV356131-201ENSMUST00000206201 750 ntBASIC17.4■□□□□ 0.38
Foxa1P35582 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.4■□□□□ 0.38
Foxa1P35582 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Foxa1P35582 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Foxa1P35582 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Foxa1P35582 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Foxa1P35582 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.39■□□□□ 0.38
Foxa1P35582 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Foxa1P35582 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Foxa1P35582 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Foxa1P35582 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms