Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.33■□□□□ 0.85
RORAP35398 C1orf229-201ENST00000623686 2258 ntBASIC20.33■□□□□ 0.84
RORAP35398 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RORAP35398 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.32■□□□□ 0.84
RORAP35398 AP004607.7-201ENST00000527152 1677 ntBASIC20.32■□□□□ 0.84
RORAP35398 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.32■□□□□ 0.84
RORAP35398 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 ID1-201ENST00000376105 1233 ntBASIC20.32■□□□□ 0.84
RORAP35398 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RORAP35398 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RORAP35398 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RORAP35398 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.32■□□□□ 0.84
RORAP35398 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RORAP35398 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RORAP35398 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.31■□□□□ 0.84
RORAP35398 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RORAP35398 AC068473.5-201ENST00000616428 2072 ntBASIC20.31■□□□□ 0.84
RORAP35398 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.31■□□□□ 0.84
RORAP35398 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RORAP35398 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RORAP35398 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RORAP35398 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RORAP35398 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RORAP35398 AC137767.1-201ENST00000602918 1920 ntBASIC20.3■□□□□ 0.84
RORAP35398 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RORAP35398 AC133561.1-201ENST00000568600 2415 ntBASIC20.3■□□□□ 0.84
RORAP35398 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.3■□□□□ 0.84
RORAP35398 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.3■□□□□ 0.84
RORAP35398 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RORAP35398 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RORAP35398 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
RORAP35398 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RORAP35398 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RORAP35398 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RORAP35398 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.29■□□□□ 0.84
RORAP35398 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.29■□□□□ 0.84
RORAP35398 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.29■□□□□ 0.84
RORAP35398 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.29■□□□□ 0.84
RORAP35398 AL034346.1-201ENST00000568244 1277 ntBASIC20.29■□□□□ 0.84
RORAP35398 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RORAP35398 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.29■□□□□ 0.84
RORAP35398 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RORAP35398 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RORAP35398 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.29■□□□□ 0.84
RORAP35398 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RORAP35398 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RORAP35398 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RORAP35398 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RORAP35398 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RORAP35398 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RORAP35398 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.28■□□□□ 0.84
RORAP35398 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.28■□□□□ 0.84
RORAP35398 AC011767.1-201ENST00000617410 1153 ntBASIC20.28■□□□□ 0.84
RORAP35398 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RORAP35398 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RORAP35398 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RORAP35398 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.28■□□□□ 0.84
RORAP35398 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RORAP35398 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RORAP35398 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RORAP35398 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RORAP35398 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RORAP35398 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 AC026185.1-201ENST00000445748 174 ntBASIC20.27■□□□□ 0.84
RORAP35398 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.27■□□□□ 0.84
RORAP35398 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.27■□□□□ 0.84
RORAP35398 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RORAP35398 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RORAP35398 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RORAP35398 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.26■□□□□ 0.83
RORAP35398 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RORAP35398 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms