Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.87■■□□□ 1.09
PTPN3P26045 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PTPN3P26045 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN3P26045 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN3P26045 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN3P26045 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PTPN3P26045 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN3P26045 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN3P26045 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.86■■□□□ 1.09
PTPN3P26045 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
PTPN3P26045 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN3P26045 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN3P26045 AC007375.3-201ENST00000600936 2314 ntBASIC21.86■■□□□ 1.09
PTPN3P26045 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
PTPN3P26045 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.86■■□□□ 1.09
PTPN3P26045 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PTPN3P26045 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN3P26045 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PTPN3P26045 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN3P26045 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN3P26045 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN3P26045 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.85■■□□□ 1.09
PTPN3P26045 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN3P26045 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.85■■□□□ 1.09
PTPN3P26045 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.85■■□□□ 1.09
PTPN3P26045 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.85■■□□□ 1.09
PTPN3P26045 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.85■■□□□ 1.09
PTPN3P26045 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN3P26045 AC244015.2-201ENST00000616358 1861 ntBASIC21.85■■□□□ 1.09
PTPN3P26045 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN3P26045 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN3P26045 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN3P26045 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN3P26045 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN3P26045 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN3P26045 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.84■■□□□ 1.09
PTPN3P26045 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.84■■□□□ 1.09
PTPN3P26045 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.84■■□□□ 1.09
PTPN3P26045 AC105233.4-201ENST00000642045 216 ntBASIC21.84■■□□□ 1.09
PTPN3P26045 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN3P26045 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PTPN3P26045 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN3P26045 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN3P26045 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN3P26045 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN3P26045 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN3P26045 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
PTPN3P26045 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN3P26045 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN3P26045 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN3P26045 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
PTPN3P26045 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN3P26045 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN3P26045 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN3P26045 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN3P26045 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN3P26045 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN3P26045 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN3P26045 MIR572-201ENST00000384983 95 ntBASIC21.82■■□□□ 1.08
PTPN3P26045 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.82■■□□□ 1.08
PTPN3P26045 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPN3P26045 AC142381.2-201ENST00000566120 298 ntBASIC21.82■■□□□ 1.08
PTPN3P26045 AC005837.3-201ENST00000612163 286 ntBASIC21.82■■□□□ 1.08
PTPN3P26045 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN3P26045 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN3P26045 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPN3P26045 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN3P26045 AP006587.3-201ENST00000525742 1516 ntBASIC21.81■■□□□ 1.08
PTPN3P26045 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPN3P26045 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN3P26045 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.81■■□□□ 1.08
PTPN3P26045 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN3P26045 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.81■■□□□ 1.08
PTPN3P26045 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN3P26045 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPN3P26045 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN3P26045 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN3P26045 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PTPN3P26045 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN3P26045 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN3P26045 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN3P26045 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN3P26045 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.8■■□□□ 1.08
PTPN3P26045 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
PTPN3P26045 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN3P26045 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN3P26045 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PTPN3P26045 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.79■■□□□ 1.08
PTPN3P26045 AC003102.1-202ENST00000563394 1796 ntBASIC21.79■■□□□ 1.08
PTPN3P26045 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN3P26045 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN3P26045 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.79■■□□□ 1.08
PTPN3P26045 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN3P26045 MIR638-201ENST00000385237 100 ntBASIC21.79■■□□□ 1.08
PTPN3P26045 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.79■■□□□ 1.08
PTPN3P26045 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.79■■□□□ 1.08
PTPN3P26045 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.79■■□□□ 1.08
PTPN3P26045 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PTPN3P26045 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PTPN3P26045 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms