Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.8■□□□□ 0.12
Col8a2P25318 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Col8a2P25318 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.8■□□□□ 0.12
Col8a2P25318 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.8■□□□□ 0.12
Col8a2P25318 Gm6365-201ENSMUST00000054711 744 ntBASIC15.8■□□□□ 0.12
Col8a2P25318 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col8a2P25318 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col8a2P25318 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Gm10602-201ENSMUST00000098239 609 ntBASIC15.79■□□□□ 0.12
Col8a2P25318 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col8a2P25318 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Col8a2P25318 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.78■□□□□ 0.12
Col8a2P25318 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Col8a2P25318 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col8a2P25318 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col8a2P25318 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col8a2P25318 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col8a2P25318 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col8a2P25318 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Col8a2P25318 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col8a2P25318 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.77■□□□□ 0.12
Col8a2P25318 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col8a2P25318 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col8a2P25318 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col8a2P25318 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col8a2P25318 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.77■□□□□ 0.12
Col8a2P25318 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Col8a2P25318 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Col8a2P25318 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Col8a2P25318 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.77■□□□□ 0.11
Col8a2P25318 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Col8a2P25318 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col8a2P25318 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col8a2P25318 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col8a2P25318 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Col8a2P25318 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.77■□□□□ 0.11
Col8a2P25318 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col8a2P25318 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col8a2P25318 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col8a2P25318 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col8a2P25318 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.76■□□□□ 0.11
Col8a2P25318 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col8a2P25318 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col8a2P25318 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col8a2P25318 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Col8a2P25318 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.76■□□□□ 0.11
Col8a2P25318 Gm27011-201ENSMUST00000182352 972 ntBASIC15.76■□□□□ 0.11
Col8a2P25318 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.76■□□□□ 0.11
Col8a2P25318 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.76■□□□□ 0.11
Col8a2P25318 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col8a2P25318 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col8a2P25318 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col8a2P25318 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col8a2P25318 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.75■□□□□ 0.11
Col8a2P25318 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.75■□□□□ 0.11
Col8a2P25318 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.75■□□□□ 0.11
Col8a2P25318 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.75■□□□□ 0.11
Col8a2P25318 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.75■□□□□ 0.11
Col8a2P25318 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col8a2P25318 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col8a2P25318 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col8a2P25318 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col8a2P25318 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col8a2P25318 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col8a2P25318 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Col8a2P25318 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Col8a2P25318 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.74■□□□□ 0.11
Col8a2P25318 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col8a2P25318 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms