Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.69□□□□□ -0.06
Ccl1P10146 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccl1P10146 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ccl1P10146 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl1P10146 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.68□□□□□ -0.06
Ccl1P10146 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccl1P10146 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.68□□□□□ -0.06
Ccl1P10146 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccl1P10146 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ccl1P10146 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 AA386476-201ENSMUST00000098781 1665 ntBASIC14.68□□□□□ -0.06
Ccl1P10146 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccl1P10146 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccl1P10146 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccl1P10146 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.67□□□□□ -0.06
Ccl1P10146 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.67□□□□□ -0.06
Ccl1P10146 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ccl1P10146 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ccl1P10146 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ccl1P10146 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccl1P10146 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ccl1P10146 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ccl1P10146 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccl1P10146 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccl1P10146 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccl1P10146 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ccl1P10146 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccl1P10146 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.65□□□□□ -0.06
Ccl1P10146 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.65□□□□□ -0.06
Ccl1P10146 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ccl1P10146 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl1P10146 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.07
Ccl1P10146 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Ccl1P10146 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.64□□□□□ -0.07
Ccl1P10146 Gm12366-201ENSMUST00000121722 873 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms