Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cops4O88544 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cops4O88544 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
Cops4O88544 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cops4O88544 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
Cops4O88544 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.43■□□□□ 0.38
Cops4O88544 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cops4O88544 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops4O88544 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cops4O88544 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.42■□□□□ 0.38
Cops4O88544 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.42■□□□□ 0.38
Cops4O88544 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cops4O88544 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Cops4O88544 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cops4O88544 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops4O88544 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops4O88544 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops4O88544 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cops4O88544 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops4O88544 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cops4O88544 Gm22238-201ENSMUST00000175222 88 ntBASIC17.41■□□□□ 0.38
Cops4O88544 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.41■□□□□ 0.38
Cops4O88544 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.41■□□□□ 0.38
Cops4O88544 Rps24-207ENSMUST00000224568 714 ntBASIC17.41■□□□□ 0.38
Cops4O88544 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cops4O88544 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.41■□□□□ 0.38
Cops4O88544 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.41■□□□□ 0.38
Cops4O88544 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops4O88544 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops4O88544 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops4O88544 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cops4O88544 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops4O88544 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops4O88544 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops4O88544 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.4■□□□□ 0.38
Cops4O88544 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Cops4O88544 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Cops4O88544 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops4O88544 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cops4O88544 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cops4O88544 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cops4O88544 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cops4O88544 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.39■□□□□ 0.37
Cops4O88544 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cops4O88544 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cops4O88544 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cops4O88544 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cops4O88544 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops4O88544 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cops4O88544 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops4O88544 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops4O88544 Gm14117-201ENSMUST00000122417 843 ntBASIC17.37■□□□□ 0.37
Cops4O88544 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cops4O88544 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms