Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.73■□□□□ 0.59
Pknox1O70477 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pknox1O70477 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pknox1O70477 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pknox1O70477 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pknox1O70477 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pknox1O70477 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pknox1O70477 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pknox1O70477 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pknox1O70477 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pknox1O70477 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pknox1O70477 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pknox1O70477 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pknox1O70477 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pknox1O70477 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Pknox1O70477 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pknox1O70477 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Pknox1O70477 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pknox1O70477 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.72■□□□□ 0.59
Pknox1O70477 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Pknox1O70477 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Pknox1O70477 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pknox1O70477 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pknox1O70477 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.71■□□□□ 0.59
Pknox1O70477 Gm11421-201ENSMUST00000122124 294 ntBASIC18.71■□□□□ 0.59
Pknox1O70477 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pknox1O70477 Rarb-207ENSMUST00000225921 2756 ntBASIC18.7■□□□□ 0.58
Pknox1O70477 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.7■□□□□ 0.58
Pknox1O70477 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.7■□□□□ 0.58
Pknox1O70477 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pknox1O70477 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.69■□□□□ 0.58
Pknox1O70477 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pknox1O70477 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.69■□□□□ 0.58
Pknox1O70477 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pknox1O70477 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pknox1O70477 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Gm12821-201ENSMUST00000120022 600 ntBASIC18.68■□□□□ 0.58
Pknox1O70477 Gm8493-201ENSMUST00000196881 489 ntBASIC18.68■□□□□ 0.58
Pknox1O70477 Gm43173-201ENSMUST00000202246 593 ntBASIC18.68■□□□□ 0.58
Pknox1O70477 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pknox1O70477 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pknox1O70477 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pknox1O70477 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.67■□□□□ 0.58
Pknox1O70477 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pknox1O70477 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pknox1O70477 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pknox1O70477 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pknox1O70477 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pknox1O70477 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Pknox1O70477 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pknox1O70477 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pknox1O70477 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pknox1O70477 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Pknox1O70477 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms