Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gfi1bO70237 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
Gfi1bO70237 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gfi1bO70237 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.74■□□□□ 0.11
Gfi1bO70237 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Gfi1bO70237 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Gfi1bO70237 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gfi1bO70237 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gfi1bO70237 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Gfi1bO70237 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gfi1bO70237 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.73■□□□□ 0.11
Gfi1bO70237 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Gfi1bO70237 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gfi1bO70237 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gfi1bO70237 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gfi1bO70237 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gfi1bO70237 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gfi1bO70237 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.72■□□□□ 0.11
Gfi1bO70237 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.72■□□□□ 0.11
Gfi1bO70237 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gfi1bO70237 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gfi1bO70237 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gfi1bO70237 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gfi1bO70237 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gfi1bO70237 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gfi1bO70237 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gfi1bO70237 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gfi1bO70237 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gfi1bO70237 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.71■□□□□ 0.11
Gfi1bO70237 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gfi1bO70237 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gfi1bO70237 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Gfi1bO70237 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gfi1bO70237 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.71■□□□□ 0.11
Gfi1bO70237 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.71■□□□□ 0.11
Gfi1bO70237 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gfi1bO70237 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.71■□□□□ 0.11
Gfi1bO70237 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gfi1bO70237 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gfi1bO70237 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gfi1bO70237 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gfi1bO70237 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Gfi1bO70237 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.7■□□□□ 0.1
Gfi1bO70237 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Gfi1bO70237 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gfi1bO70237 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Gfi1bO70237 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.69■□□□□ 0.1
Gfi1bO70237 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gfi1bO70237 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gfi1bO70237 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Gfi1bO70237 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gfi1bO70237 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.68■□□□□ 0.1
Gfi1bO70237 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Gfi1bO70237 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.68■□□□□ 0.1
Gfi1bO70237 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Gfi1bO70237 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gfi1bO70237 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms