Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn5O54942 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Cldn5O54942 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.65■□□□□ 0.74
Cldn5O54942 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cldn5O54942 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.65■□□□□ 0.74
Cldn5O54942 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Cldn5O54942 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.65■□□□□ 0.74
Cldn5O54942 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.65■□□□□ 0.74
Cldn5O54942 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.65■□□□□ 0.74
Cldn5O54942 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cldn5O54942 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.65■□□□□ 0.74
Cldn5O54942 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn5O54942 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.65■□□□□ 0.74
Cldn5O54942 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cldn5O54942 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn5O54942 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn5O54942 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn5O54942 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cldn5O54942 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cldn5O54942 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn5O54942 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn5O54942 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn5O54942 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn5O54942 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn5O54942 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn5O54942 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldn5O54942 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldn5O54942 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Cldn5O54942 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.63■□□□□ 0.73
Cldn5O54942 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn5O54942 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn5O54942 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cldn5O54942 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn5O54942 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cldn5O54942 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cldn5O54942 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn5O54942 Gm7290-201ENSMUST00000104990 617 ntBASIC19.62■□□□□ 0.73
Cldn5O54942 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Cldn5O54942 Gm12918-201ENSMUST00000120234 636 ntBASIC19.62■□□□□ 0.73
Cldn5O54942 Gm15710-201ENSMUST00000121821 636 ntBASIC19.62■□□□□ 0.73
Cldn5O54942 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cldn5O54942 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn5O54942 Gm5075-201ENSMUST00000196916 622 ntBASIC19.62■□□□□ 0.73
Cldn5O54942 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cldn5O54942 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn5O54942 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.62■□□□□ 0.73
Cldn5O54942 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.62■□□□□ 0.73
Cldn5O54942 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn5O54942 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn5O54942 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn5O54942 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn5O54942 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.61■□□□□ 0.73
Cldn5O54942 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn5O54942 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.61■□□□□ 0.73
Cldn5O54942 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn5O54942 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cldn5O54942 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn5O54942 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn5O54942 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn5O54942 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn5O54942 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cldn5O54942 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
Cldn5O54942 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.6■□□□□ 0.73
Cldn5O54942 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cldn5O54942 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn5O54942 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms