Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Gm9870-201ENSMUST00000063874 645 ntBASIC17.95■□□□□ 0.46
ClockO08785 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ClockO08785 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.95■□□□□ 0.46
ClockO08785 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.94■□□□□ 0.46
ClockO08785 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClockO08785 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ClockO08785 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ClockO08785 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClockO08785 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClockO08785 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.94■□□□□ 0.46
ClockO08785 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClockO08785 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClockO08785 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClockO08785 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClockO08785 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ClockO08785 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ClockO08785 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ClockO08785 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ClockO08785 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ClockO08785 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.93■□□□□ 0.46
ClockO08785 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClockO08785 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.92■□□□□ 0.46
ClockO08785 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.92■□□□□ 0.46
ClockO08785 Etf1-202ENSMUST00000180351 108 ntBASIC17.92■□□□□ 0.46
ClockO08785 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ClockO08785 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClockO08785 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClockO08785 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClockO08785 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.91■□□□□ 0.46
ClockO08785 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.91■□□□□ 0.46
ClockO08785 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClockO08785 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ClockO08785 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ClockO08785 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClockO08785 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClockO08785 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
ClockO08785 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ClockO08785 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
ClockO08785 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClockO08785 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.9■□□□□ 0.46
ClockO08785 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.9■□□□□ 0.46
ClockO08785 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ClockO08785 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClockO08785 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClockO08785 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ClockO08785 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClockO08785 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClockO08785 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClockO08785 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
ClockO08785 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.89■□□□□ 0.45
ClockO08785 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.89■□□□□ 0.45
ClockO08785 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.89■□□□□ 0.45
ClockO08785 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ClockO08785 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClockO08785 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClockO08785 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ClockO08785 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClockO08785 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms