Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TprF6ZDS4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TprF6ZDS4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TprF6ZDS4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TprF6ZDS4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TprF6ZDS4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TprF6ZDS4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TprF6ZDS4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TprF6ZDS4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TprF6ZDS4 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.35■□□□□ 0.37
TprF6ZDS4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.35■□□□□ 0.37
TprF6ZDS4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TprF6ZDS4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TprF6ZDS4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TprF6ZDS4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.35■□□□□ 0.37
TprF6ZDS4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TprF6ZDS4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TprF6ZDS4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TprF6ZDS4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TprF6ZDS4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TprF6ZDS4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.34■□□□□ 0.37
TprF6ZDS4 Gm2559-201ENSMUST00000201323 363 ntBASIC17.33■□□□□ 0.37
TprF6ZDS4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TprF6ZDS4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TprF6ZDS4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TprF6ZDS4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TprF6ZDS4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TprF6ZDS4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TprF6ZDS4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TprF6ZDS4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TprF6ZDS4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TprF6ZDS4 Gm6659-201ENSMUST00000174752 547 ntBASIC17.32■□□□□ 0.36
TprF6ZDS4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TprF6ZDS4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TprF6ZDS4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TprF6ZDS4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TprF6ZDS4 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.32■□□□□ 0.36
TprF6ZDS4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TprF6ZDS4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TprF6ZDS4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.31■□□□□ 0.36
TprF6ZDS4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.31■□□□□ 0.36
TprF6ZDS4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TprF6ZDS4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TprF6ZDS4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TprF6ZDS4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TprF6ZDS4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TprF6ZDS4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TprF6ZDS4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TprF6ZDS4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TprF6ZDS4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TprF6ZDS4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TprF6ZDS4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TprF6ZDS4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TprF6ZDS4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TprF6ZDS4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TprF6ZDS4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TprF6ZDS4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.29■□□□□ 0.36
TprF6ZDS4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.29■□□□□ 0.36
TprF6ZDS4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.29■□□□□ 0.36
TprF6ZDS4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TprF6ZDS4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TprF6ZDS4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TprF6ZDS4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TprF6ZDS4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TprF6ZDS4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TprF6ZDS4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TprF6ZDS4 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.28■□□□□ 0.36
TprF6ZDS4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TprF6ZDS4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TprF6ZDS4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TprF6ZDS4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TprF6ZDS4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TprF6ZDS4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TprF6ZDS4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TprF6ZDS4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms