Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.39■□□□□ 0.69
Atf6F6VAN0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6F6VAN0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6F6VAN0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.36■□□□□ 0.69
Atf6F6VAN0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.36■□□□□ 0.69
Atf6F6VAN0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Atf6F6VAN0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.35■□□□□ 0.69
Atf6F6VAN0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Atf6F6VAN0 BC021767-201ENSMUST00000126387 1716 ntBASIC19.34■□□□□ 0.69
Atf6F6VAN0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.34■□□□□ 0.69
Atf6F6VAN0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Atf6F6VAN0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atf6F6VAN0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atf6F6VAN0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atf6F6VAN0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atf6F6VAN0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Atf6F6VAN0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Atf6F6VAN0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.33■□□□□ 0.68
Atf6F6VAN0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atf6F6VAN0 Gm38205-201ENSMUST00000192243 258 ntBASIC19.33■□□□□ 0.68
Atf6F6VAN0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atf6F6VAN0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atf6F6VAN0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Atf6F6VAN0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atf6F6VAN0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Atf6F6VAN0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atf6F6VAN0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms