Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lonrf1D3YY23 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lonrf1D3YY23 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lonrf1D3YY23 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lonrf1D3YY23 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.44■□□□□ 0.7
Lonrf1D3YY23 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf1D3YY23 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf1D3YY23 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lonrf1D3YY23 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf1D3YY23 Gm43173-201ENSMUST00000202246 593 ntBASIC19.43■□□□□ 0.7
Lonrf1D3YY23 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf1D3YY23 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lonrf1D3YY23 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Gm8493-201ENSMUST00000196881 489 ntBASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lonrf1D3YY23 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Gm7860-201ENSMUST00000121190 879 ntBASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lonrf1D3YY23 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Gm27801-201ENSMUST00000184174 223 ntBASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lonrf1D3YY23 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lonrf1D3YY23 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lonrf1D3YY23 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Lonrf1D3YY23 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lonrf1D3YY23 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms