Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssxa1B1AUS7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssxa1B1AUS7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssxa1B1AUS7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ssxa1B1AUS7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssxa1B1AUS7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Gm13146-201ENSMUST00000118508 780 ntBASIC18■□□□□ 0.47
Ssxa1B1AUS7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssxa1B1AUS7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssxa1B1AUS7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ssxa1B1AUS7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssxa1B1AUS7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssxa1B1AUS7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ssxa1B1AUS7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ssxa1B1AUS7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssxa1B1AUS7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Iqck-206ENSMUST00000208658 2891 ntBASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssxa1B1AUS7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms