Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Gm8587-201ENSMUST00000076538 843 ntBASIC15.53■□□□□ 0.08
Chd6A3KFM7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd6A3KFM7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd6A3KFM7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chd6A3KFM7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.52■□□□□ 0.08
Chd6A3KFM7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.52■□□□□ 0.08
Chd6A3KFM7 Gm18959-201ENSMUST00000208954 655 ntBASIC15.52■□□□□ 0.08
Chd6A3KFM7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chd6A3KFM7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd6A3KFM7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.52■□□□□ 0.07
Chd6A3KFM7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.52■□□□□ 0.07
Chd6A3KFM7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd6A3KFM7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chd6A3KFM7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chd6A3KFM7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd6A3KFM7 Gm6623-201ENSMUST00000173570 544 ntBASIC15.51■□□□□ 0.07
Chd6A3KFM7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd6A3KFM7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd6A3KFM7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd6A3KFM7 Mir6236-201ENSMUST00000184437 123 ntBASIC15.51■□□□□ 0.07
Chd6A3KFM7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chd6A3KFM7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd6A3KFM7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd6A3KFM7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.5■□□□□ 0.07
Chd6A3KFM7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chd6A3KFM7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.5■□□□□ 0.07
Chd6A3KFM7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chd6A3KFM7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.5■□□□□ 0.07
Chd6A3KFM7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Chd6A3KFM7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd6A3KFM7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd6A3KFM7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd6A3KFM7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd6A3KFM7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Chd6A3KFM7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd6A3KFM7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.49■□□□□ 0.07
Chd6A3KFM7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.49■□□□□ 0.07
Chd6A3KFM7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd6A3KFM7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd6A3KFM7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd6A3KFM7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Gm17807-201ENSMUST00000186869 298 ntBASIC15.48■□□□□ 0.07
Chd6A3KFM7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.48■□□□□ 0.07
Chd6A3KFM7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd6A3KFM7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd6A3KFM7 Gm42545-201ENSMUST00000202755 922 ntBASIC15.46■□□□□ 0.07
Chd6A3KFM7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chd6A3KFM7 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.46■□□□□ 0.07
Chd6A3KFM7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Chd6A3KFM7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.46■□□□□ 0.07
Chd6A3KFM7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Chd6A3KFM7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
Chd6A3KFM7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chd6A3KFM7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Chd6A3KFM7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms