Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5089A1L3C8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Gm6576-201ENSMUST00000169678 883 ntBASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5089A1L3C8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Gm5643-201ENSMUST00000117081 966 ntBASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5089A1L3C8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Gm7977-201ENSMUST00000193787 748 ntBASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5089A1L3C8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm5089A1L3C8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5089A1L3C8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5089A1L3C8 Gm13836-201ENSMUST00000121159 501 ntBASIC15.15■□□□□ 0.02
Gm5089A1L3C8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.15■□□□□ 0.02
Gm5089A1L3C8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5089A1L3C8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5089A1L3C8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5089A1L3C8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5089A1L3C8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms