Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.15■□□□□ 0.34
Smim17A0A504 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.15■□□□□ 0.34
Smim17A0A504 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.15■□□□□ 0.34
Smim17A0A504 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim17A0A504 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim17A0A504 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim17A0A504 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim17A0A504 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim17A0A504 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Smim17A0A504 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Smim17A0A504 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.14■□□□□ 0.34
Smim17A0A504 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim17A0A504 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim17A0A504 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim17A0A504 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.14■□□□□ 0.33
Smim17A0A504 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.14■□□□□ 0.33
Smim17A0A504 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim17A0A504 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Smim17A0A504 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smim17A0A504 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smim17A0A504 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim17A0A504 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smim17A0A504 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smim17A0A504 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.13■□□□□ 0.33
Smim17A0A504 Gm27502-201ENSMUST00000183495 199 ntBASIC17.13■□□□□ 0.33
Smim17A0A504 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smim17A0A504 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim17A0A504 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smim17A0A504 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.12■□□□□ 0.33
Smim17A0A504 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.12■□□□□ 0.33
Smim17A0A504 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim17A0A504 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Smim17A0A504 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.11■□□□□ 0.33
Smim17A0A504 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim17A0A504 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Gm14523-201ENSMUST00000117260 558 ntBASIC17.1■□□□□ 0.33
Smim17A0A504 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.1■□□□□ 0.33
Smim17A0A504 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim17A0A504 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Smim17A0A504 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.09■□□□□ 0.33
Smim17A0A504 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.09■□□□□ 0.33
Smim17A0A504 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Gm7332-201ENSMUST00000118351 454 ntBASIC17.09■□□□□ 0.33
Smim17A0A504 Mir6236-201ENSMUST00000184437 123 ntBASIC17.09■□□□□ 0.33
Smim17A0A504 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smim17A0A504 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim17A0A504 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms