Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc194A0A140LIT1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc194A0A140LIT1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc194A0A140LIT1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc194A0A140LIT1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ccdc194A0A140LIT1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc194A0A140LIT1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc194A0A140LIT1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Gm11421-201ENSMUST00000122124 294 ntBASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Mir7075-201ENSMUST00000184187 82 ntBASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc194A0A140LIT1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Gm21956-201ENSMUST00000179946 522 ntBASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc194A0A140LIT1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms