Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gm37352-201ENSMUST00000193908 2181 ntBASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 BC021767-201ENSMUST00000126387 1716 ntBASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms