Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Gm11421-201ENSMUST00000122124 294 ntBASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-3A0A075B695 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav9d-3A0A075B695 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9d-3A0A075B695 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9d-3A0A075B695 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9d-3A0A075B695 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9d-3A0A075B695 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Smad6-203ENSMUST00000179458 273 ntBASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-3A0A075B695 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Golph3-205ENSMUST00000228671 2842 ntBASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Gm43173-201ENSMUST00000202246 593 ntBASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-3A0A075B695 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-3A0A075B695 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms