Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.61□□□□□ -0.07
Trav16A0A075B653 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav16A0A075B653 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.61□□□□□ -0.07
Trav16A0A075B653 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16A0A075B653 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16A0A075B653 BC021767-201ENSMUST00000126387 1716 ntBASIC14.61□□□□□ -0.07
Trav16A0A075B653 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.6□□□□□ -0.07
Trav16A0A075B653 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav16A0A075B653 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.59□□□□□ -0.07
Trav16A0A075B653 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav16A0A075B653 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.59□□□□□ -0.07
Trav16A0A075B653 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16A0A075B653 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav16A0A075B653 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.58□□□□□ -0.07
Trav16A0A075B653 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav16A0A075B653 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav16A0A075B653 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16A0A075B653 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.57□□□□□ -0.08
Trav16A0A075B653 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16A0A075B653 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trav16A0A075B653 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.56□□□□□ -0.08
Trav16A0A075B653 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms