Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16d-dv11A0A075B617 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 AA386476-201ENSMUST00000098781 1665 ntBASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16d-dv11A0A075B617 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16d-dv11A0A075B617 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav16d-dv11A0A075B617 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16d-dv11A0A075B617 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms