Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4n-4A0A075B615 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4n-4A0A075B615 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav4n-4A0A075B615 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav4n-4A0A075B615 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4n-4A0A075B615 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Gm11599-201ENSMUST00000118720 878 ntBASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4n-4A0A075B615 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Gm7432-201ENSMUST00000210343 879 ntBASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4n-4A0A075B615 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4n-4A0A075B615 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms