Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7n-5A0A075B604 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Gm7291-201ENSMUST00000199147 382 ntBASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7n-5A0A075B604 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav7n-5A0A075B604 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Notumos-201ENSMUST00000151998 2659 ntBASIC15.46■□□□□ 0.07
Trav7n-5A0A075B604 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav7n-5A0A075B604 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.45■□□□□ 0.06
Trav7n-5A0A075B604 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav7n-5A0A075B604 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav7n-5A0A075B604 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms