Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G3Q9Y6M4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 AP001160.3-201ENST00000601484 763 ntBASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 AL109923.1-201ENST00000618799 583 ntBASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 AC231657.2-201ENST00000624556 255 ntBASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1G3Q9Y6M4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 AC068473.5-201ENST00000616428 2072 ntBASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 AL034346.1-201ENST00000568244 1277 ntBASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1G3Q9Y6M4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CSNK1G3Q9Y6M4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.02■□□□□ 0.95
CSNK1G3Q9Y6M4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.02■□□□□ 0.95
CSNK1G3Q9Y6M4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 MIR663A-201ENST00000385250 93 ntBASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1G3Q9Y6M4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 AP004607.7-201ENST00000527152 1677 ntBASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 GPX1P1-201ENST00000388829 606 ntBASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 AC012676.1-201ENST00000574705 1949 ntBASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1G3Q9Y6M4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 OR7E47P-201ENST00000546390 1422 ntBASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 KRT18P20-201ENST00000548986 1279 ntBASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 DUX4L16-201ENST00000555130 1264 ntBASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 UBE2DNL-204ENST00000602536 740 ntBASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1G3Q9Y6M4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 AC138907.5-202ENST00000569484 235 ntBASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 MYCNOS-205ENST00000641950 531 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms