Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rhox4bQ9JI43 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Gm10420-201ENSMUST00000121713 882 ntBASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rhox4bQ9JI43 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rhox4bQ9JI43 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rhox4bQ9JI43 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rhox4bQ9JI43 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rhox4bQ9JI43 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rhox4bQ9JI43 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rhox4bQ9JI43 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rhox4bQ9JI43 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rhox4bQ9JI43 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.27■□□□□ 0.03
Rhox4bQ9JI43 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rhox4bQ9JI43 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.27■□□□□ 0.03
Rhox4bQ9JI43 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rhox4bQ9JI43 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rhox4bQ9JI43 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rhox4bQ9JI43 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rhox4bQ9JI43 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rhox4bQ9JI43 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rhox4bQ9JI43 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rhox4bQ9JI43 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rhox4bQ9JI43 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms