Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.21■□□□□ 0.35
Ubqln4Q99NB8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ubqln4Q99NB8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubqln4Q99NB8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubqln4Q99NB8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubqln4Q99NB8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubqln4Q99NB8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubqln4Q99NB8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ubqln4Q99NB8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms