Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdca3Q99M54 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.53■□□□□ 0.4
Cdca3Q99M54 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdca3Q99M54 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdca3Q99M54 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Gm12933-201ENSMUST00000120203 872 ntBASIC17.52■□□□□ 0.4
Cdca3Q99M54 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdca3Q99M54 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdca3Q99M54 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.52■□□□□ 0.39
Cdca3Q99M54 AA386476-201ENSMUST00000098781 1665 ntBASIC17.52■□□□□ 0.39
Cdca3Q99M54 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdca3Q99M54 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdca3Q99M54 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Cdca3Q99M54 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdca3Q99M54 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdca3Q99M54 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdca3Q99M54 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdca3Q99M54 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdca3Q99M54 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdca3Q99M54 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Cdca3Q99M54 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.49■□□□□ 0.39
Cdca3Q99M54 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cdca3Q99M54 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdca3Q99M54 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdca3Q99M54 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.49■□□□□ 0.39
Cdca3Q99M54 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.48■□□□□ 0.39
Cdca3Q99M54 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdca3Q99M54 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.47■□□□□ 0.39
Cdca3Q99M54 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdca3Q99M54 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms