Protein–RNA interactions for Protein: Q91XD6

Vps36, Vacuolar protein-sorting-associated protein 36, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps36Q91XD6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Gm43017-201ENSMUST00000198296 752 ntBASIC20.45■□□□□ 0.86
Vps36Q91XD6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps36Q91XD6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.44■□□□□ 0.86
Vps36Q91XD6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps36Q91XD6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Gm40848-201ENSMUST00000221998 324 ntBASIC20.43■□□□□ 0.86
Vps36Q91XD6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.43■□□□□ 0.86
Vps36Q91XD6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.43■□□□□ 0.86
Vps36Q91XD6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps36Q91XD6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.42■□□□□ 0.86
Vps36Q91XD6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps36Q91XD6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Gm7860-201ENSMUST00000121190 879 ntBASIC20.41■□□□□ 0.86
Vps36Q91XD6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps36Q91XD6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.4■□□□□ 0.86
Vps36Q91XD6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.4■□□□□ 0.86
Vps36Q91XD6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps36Q91XD6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Vps36Q91XD6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps36Q91XD6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps36Q91XD6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps36Q91XD6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.39■□□□□ 0.85
Vps36Q91XD6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps36Q91XD6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Vps36Q91XD6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.39■□□□□ 0.85
Vps36Q91XD6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps36Q91XD6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms