Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpa1Q8VEE4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rpa1Q8VEE4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpa1Q8VEE4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpa1Q8VEE4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpa1Q8VEE4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpa1Q8VEE4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.08■□□□□ 0.65
Rpa1Q8VEE4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rpa1Q8VEE4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Gm15546-201ENSMUST00000122095 826 ntBASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpa1Q8VEE4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpa1Q8VEE4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpa1Q8VEE4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpa1Q8VEE4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpa1Q8VEE4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpa1Q8VEE4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.02■□□□□ 0.64
Rpa1Q8VEE4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpa1Q8VEE4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.02■□□□□ 0.64
Rpa1Q8VEE4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpa1Q8VEE4 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.02■□□□□ 0.63
Rpa1Q8VEE4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rpa1Q8VEE4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rpa1Q8VEE4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms