Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 AC027682.1-201ENST00000562846 899 ntBASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 AC007375.3-201ENST00000600936 2314 ntBASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDH19Q8TAB3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.15
PCDH19Q8TAB3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PCDH19Q8TAB3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 MIR939-201ENST00000401314 82 ntBASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 SMUG1P1-201ENST00000590640 811 ntBASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH19Q8TAB3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 AL136967.2-201ENST00000623968 743 ntBASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDH19Q8TAB3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 AP004607.7-201ENST00000527152 1677 ntBASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH19Q8TAB3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 AC105265.2-201ENST00000467189 838 ntBASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH19Q8TAB3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 RASA4CP-201ENST00000424092 1398 ntBASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 TSPY26P-201ENST00000476365 1326 ntBASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms