Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 AC099791.1-201ENST00000416440 715 ntBASIC20.09■□□□□ 0.81
NUP43Q8NFH3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.09■□□□□ 0.81
NUP43Q8NFH3 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.09■□□□□ 0.81
NUP43Q8NFH3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.08■□□□□ 0.81
NUP43Q8NFH3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NUP43Q8NFH3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NUP43Q8NFH3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NUP43Q8NFH3 EDA-201ENST00000338901 1233 ntBASIC20.08■□□□□ 0.81
NUP43Q8NFH3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.08■□□□□ 0.81
NUP43Q8NFH3 IGHV3-19-201ENST00000521488 291 ntBASIC20.08■□□□□ 0.81
NUP43Q8NFH3 AC133561.4-201ENST00000566112 224 ntBASIC20.08■□□□□ 0.81
NUP43Q8NFH3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
NUP43Q8NFH3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NUP43Q8NFH3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
NUP43Q8NFH3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.08■□□□□ 0.8
NUP43Q8NFH3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 AP004607.7-201ENST00000527152 1677 ntBASIC20.07■□□□□ 0.8
NUP43Q8NFH3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 AC027682.1-201ENST00000562846 899 ntBASIC20.07■□□□□ 0.8
NUP43Q8NFH3 AL034346.1-201ENST00000568244 1277 ntBASIC20.07■□□□□ 0.8
NUP43Q8NFH3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 AL355001.2-201ENST00000620617 1191 ntBASIC20.07■□□□□ 0.8
NUP43Q8NFH3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 AC026471.6-201ENST00000622954 1905 ntBASIC20.07■□□□□ 0.8
NUP43Q8NFH3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUP43Q8NFH3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUP43Q8NFH3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.05■□□□□ 0.8
NUP43Q8NFH3 AP001330.3-201ENST00000520123 633 ntBASIC20.05■□□□□ 0.8
NUP43Q8NFH3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUP43Q8NFH3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUP43Q8NFH3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms