Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.76■■□□□ 1.23
RNF135Q8IUD6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.76■■□□□ 1.23
RNF135Q8IUD6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.76■■□□□ 1.23
RNF135Q8IUD6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF135Q8IUD6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF135Q8IUD6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF135Q8IUD6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.76■■□□□ 1.23
RNF135Q8IUD6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF135Q8IUD6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
RNF135Q8IUD6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF135Q8IUD6 PRORSD1P-201ENST00000295112 541 ntBASIC22.75■■□□□ 1.23
RNF135Q8IUD6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF135Q8IUD6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.75■■□□□ 1.23
RNF135Q8IUD6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.75■■□□□ 1.23
RNF135Q8IUD6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF135Q8IUD6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
RNF135Q8IUD6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF135Q8IUD6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF135Q8IUD6 ANOS2P-203ENST00000472227 1816 ntBASIC22.73■■□□□ 1.23
RNF135Q8IUD6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RNF135Q8IUD6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.73■■□□□ 1.23
RNF135Q8IUD6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.73■■□□□ 1.23
RNF135Q8IUD6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.73■■□□□ 1.23
RNF135Q8IUD6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RNF135Q8IUD6 AC098934.4-201ENST00000564127 592 ntBASIC22.73■■□□□ 1.23
RNF135Q8IUD6 SMUG1P1-201ENST00000590640 811 ntBASIC22.73■■□□□ 1.23
RNF135Q8IUD6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RNF135Q8IUD6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 LINC01529-204ENST00000636474 1715 ntBASIC22.72■■□□□ 1.23
RNF135Q8IUD6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 RPS2P52-201ENST00000469610 820 ntBASIC22.72■■□□□ 1.23
RNF135Q8IUD6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 AF201337.1-201ENST00000520239 748 ntBASIC22.72■■□□□ 1.23
RNF135Q8IUD6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF135Q8IUD6 AC144652.1-201ENST00000609974 1624 ntBASIC22.71■■□□□ 1.23
RNF135Q8IUD6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF135Q8IUD6 DUSP8P5-201ENST00000422884 1815 ntBASIC22.71■■□□□ 1.23
RNF135Q8IUD6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
RNF135Q8IUD6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
RNF135Q8IUD6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF135Q8IUD6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 RNA5SP413-201ENST00000516373 109 ntBASIC22.69■■□□□ 1.22
RNF135Q8IUD6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 AC105036.2-201ENST00000569468 176 ntBASIC22.69■■□□□ 1.22
RNF135Q8IUD6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 AC104187.1-201ENST00000607510 612 ntBASIC22.69■■□□□ 1.22
RNF135Q8IUD6 AP006294.2-201ENST00000641667 209 ntBASIC22.69■■□□□ 1.22
RNF135Q8IUD6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF135Q8IUD6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms