Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Gm13234-201ENSMUST00000120010 747 ntBASIC19.94■□□□□ 0.78
Q8CD60 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.94■□□□□ 0.78
Q8CD60 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Q8CD60 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q8CD60 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Q8CD60 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Q8CD60 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q8CD60 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q8CD60 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q8CD60 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8CD60 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.93■□□□□ 0.78
Q8CD60 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8CD60 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.93■□□□□ 0.78
Q8CD60 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Q8CD60 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Q8CD60 Gm42778-201ENSMUST00000199644 553 ntBASIC19.93■□□□□ 0.78
Q8CD60 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.93■□□□□ 0.78
Q8CD60 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Q8CD60 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.93■□□□□ 0.78
Q8CD60 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8CD60 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Q8CD60 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8CD60 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8CD60 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.93■□□□□ 0.78
Q8CD60 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Q8CD60 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
Q8CD60 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.92■□□□□ 0.78
Q8CD60 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.92■□□□□ 0.78
Q8CD60 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q8CD60 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Q8CD60 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8CD60 Gm42642-201ENSMUST00000200683 355 ntBASIC19.91■□□□□ 0.78
Q8CD60 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8CD60 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8CD60 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Q8CD60 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Q8CD60 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8CD60 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8CD60 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8CD60 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8CD60 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.9■□□□□ 0.78
Q8CD60 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.9■□□□□ 0.78
Q8CD60 Gm10033-202ENSMUST00000211874 928 ntBASIC19.9■□□□□ 0.78
Q8CD60 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8CD60 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8CD60 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8CD60 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8CD60 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Q8CD60 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
Q8CD60 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Q8CD60 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Q8CD60 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Q8CD60 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8CD60 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8CD60 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8CD60 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8CD60 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8CD60 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.89■□□□□ 0.77
Q8CD60 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Gm8495-201ENSMUST00000188740 694 ntBASIC19.88■□□□□ 0.77
Q8CD60 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8CD60 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Gm13146-201ENSMUST00000118508 780 ntBASIC19.87■□□□□ 0.77
Q8CD60 Gm26571-201ENSMUST00000181399 666 ntBASIC19.87■□□□□ 0.77
Q8CD60 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.87■□□□□ 0.77
Q8CD60 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.87■□□□□ 0.77
Q8CD60 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8CD60 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8CD60 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8CD60 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.86■□□□□ 0.77
Q8CD60 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms