Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm27405-201ENSMUST00000184201 112 ntBASIC19.64■□□□□ 0.73
Trim62Q80V85 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.64■□□□□ 0.73
Trim62Q80V85 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.64■□□□□ 0.73
Trim62Q80V85 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trim62Q80V85 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim62Q80V85 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim62Q80V85 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim62Q80V85 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim62Q80V85 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim62Q80V85 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim62Q80V85 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim62Q80V85 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim62Q80V85 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim62Q80V85 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim62Q80V85 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim62Q80V85 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim62Q80V85 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim62Q80V85 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim62Q80V85 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim62Q80V85 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim62Q80V85 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.62■□□□□ 0.73
Trim62Q80V85 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trim62Q80V85 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim62Q80V85 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim62Q80V85 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
Trim62Q80V85 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.61■□□□□ 0.73
Trim62Q80V85 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim62Q80V85 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.61■□□□□ 0.73
Trim62Q80V85 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim62Q80V85 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim62Q80V85 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim62Q80V85 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim62Q80V85 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim62Q80V85 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.59■□□□□ 0.73
Trim62Q80V85 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim62Q80V85 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim62Q80V85 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Trim62Q80V85 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim62Q80V85 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.58■□□□□ 0.73
Trim62Q80V85 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim62Q80V85 Gm7291-201ENSMUST00000199147 382 ntBASIC19.58■□□□□ 0.72
Trim62Q80V85 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim62Q80V85 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim62Q80V85 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim62Q80V85 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim62Q80V85 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim62Q80V85 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim62Q80V85 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim62Q80V85 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim62Q80V85 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim62Q80V85 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Trim62Q80V85 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim62Q80V85 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Trim62Q80V85 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.57■□□□□ 0.72
Trim62Q80V85 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.57■□□□□ 0.72
Trim62Q80V85 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.57■□□□□ 0.72
Trim62Q80V85 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim62Q80V85 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim62Q80V85 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.56■□□□□ 0.72
Trim62Q80V85 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim62Q80V85 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim62Q80V85 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim62Q80V85 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim62Q80V85 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim62Q80V85 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim62Q80V85 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim62Q80V85 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim62Q80V85 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms