Protein–RNA interactions for Protein: Q80ST9

Lca5, Lebercilin, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lca5Q80ST9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lca5Q80ST9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lca5Q80ST9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.72■■□□□ 1.07
Lca5Q80ST9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Gm29257-201ENSMUST00000186115 639 ntBASIC21.71■■□□□ 1.07
Lca5Q80ST9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Lca5Q80ST9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Lca5Q80ST9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Gm10602-201ENSMUST00000098239 609 ntBASIC21.7■■□□□ 1.06
Lca5Q80ST9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lca5Q80ST9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Mir5133-201ENSMUST00000174955 77 ntBASIC21.69■■□□□ 1.06
Lca5Q80ST9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lca5Q80ST9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Lca5Q80ST9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.69■■□□□ 1.06
Lca5Q80ST9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Lca5Q80ST9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lca5Q80ST9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lca5Q80ST9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lca5Q80ST9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.67■■□□□ 1.06
Lca5Q80ST9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lca5Q80ST9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lca5Q80ST9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lca5Q80ST9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lca5Q80ST9 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.67■■□□□ 1.06
Lca5Q80ST9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.66■■□□□ 1.06
Lca5Q80ST9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.66■■□□□ 1.06
Lca5Q80ST9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lca5Q80ST9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Lca5Q80ST9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lca5Q80ST9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Lca5Q80ST9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lca5Q80ST9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lca5Q80ST9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lca5Q80ST9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lca5Q80ST9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Lca5Q80ST9 Gm13148-201ENSMUST00000118892 745 ntBASIC21.64■■□□□ 1.05
Lca5Q80ST9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lca5Q80ST9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.64■■□□□ 1.05
Lca5Q80ST9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lca5Q80ST9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lca5Q80ST9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lca5Q80ST9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lca5Q80ST9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms