Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrcc1Q60596 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrcc1Q60596 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrcc1Q60596 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrcc1Q60596 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Xrcc1Q60596 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Xrcc1Q60596 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrcc1Q60596 Gm27405-201ENSMUST00000184201 112 ntBASIC18.11■□□□□ 0.49
Xrcc1Q60596 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.11■□□□□ 0.49
Xrcc1Q60596 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrcc1Q60596 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrcc1Q60596 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrcc1Q60596 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrcc1Q60596 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrcc1Q60596 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Xrcc1Q60596 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrcc1Q60596 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.1■□□□□ 0.49
Xrcc1Q60596 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrcc1Q60596 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.09■□□□□ 0.49
Xrcc1Q60596 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Gm7291-201ENSMUST00000199147 382 ntBASIC18.09■□□□□ 0.49
Xrcc1Q60596 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.09■□□□□ 0.49
Xrcc1Q60596 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Xrcc1Q60596 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Xrcc1Q60596 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Xrcc1Q60596 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Xrcc1Q60596 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Xrcc1Q60596 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Xrcc1Q60596 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Xrcc1Q60596 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.08■□□□□ 0.48
Xrcc1Q60596 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.08■□□□□ 0.48
Xrcc1Q60596 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrcc1Q60596 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.08■□□□□ 0.48
Xrcc1Q60596 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrcc1Q60596 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrcc1Q60596 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Gm13534-201ENSMUST00000121169 513 ntBASIC18.07■□□□□ 0.48
Xrcc1Q60596 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.07■□□□□ 0.48
Xrcc1Q60596 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Xrcc1Q60596 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Gm7514-201ENSMUST00000209475 934 ntBASIC18.06■□□□□ 0.48
Xrcc1Q60596 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Xrcc1Q60596 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrcc1Q60596 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.06■□□□□ 0.48
Xrcc1Q60596 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Golph3-202ENSMUST00000226517 2359 ntBASIC18.05■□□□□ 0.48
Xrcc1Q60596 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.05■□□□□ 0.48
Xrcc1Q60596 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.05■□□□□ 0.48
Xrcc1Q60596 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.05■□□□□ 0.48
Xrcc1Q60596 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrcc1Q60596 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms