Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdkl5Q3UTQ8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdkl5Q3UTQ8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdkl5Q3UTQ8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Cdkl5Q3UTQ8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cdkl5Q3UTQ8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Cdkl5Q3UTQ8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdkl5Q3UTQ8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cdkl5Q3UTQ8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl5Q3UTQ8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.94■■□□□ 1.1
Cdkl5Q3UTQ8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Cdkl5Q3UTQ8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.92■■□□□ 1.1
Cdkl5Q3UTQ8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Cdkl5Q3UTQ8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl5Q3UTQ8 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms