Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AP004607.7-201ENST00000527152 1677 ntBASIC26.34■■□□□ 1.81
PDE1AP54750 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
PDE1AP54750 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.33■■□□□ 1.81
PDE1AP54750 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.81
PDE1AP54750 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
PDE1AP54750 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.33■■□□□ 1.81
PDE1AP54750 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.33■■□□□ 1.81
PDE1AP54750 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PDE1AP54750 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
PDE1AP54750 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PDE1AP54750 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDE1AP54750 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
PDE1AP54750 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDE1AP54750 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE1AP54750 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDE1AP54750 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.32■■□□□ 1.8
PDE1AP54750 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE1AP54750 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE1AP54750 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE1AP54750 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE1AP54750 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.32■■□□□ 1.8
PDE1AP54750 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE1AP54750 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE1AP54750 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE1AP54750 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE1AP54750 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.31■■□□□ 1.8
PDE1AP54750 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.31■■□□□ 1.8
PDE1AP54750 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.31■■□□□ 1.8
PDE1AP54750 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE1AP54750 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
PDE1AP54750 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE1AP54750 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE1AP54750 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE1AP54750 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.3■■□□□ 1.8
PDE1AP54750 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.3■■□□□ 1.8
PDE1AP54750 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDE1AP54750 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDE1AP54750 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDE1AP54750 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDE1AP54750 AC007375.3-201ENST00000600936 2314 ntBASIC26.3■■□□□ 1.8
PDE1AP54750 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
PDE1AP54750 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDE1AP54750 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.29■■□□□ 1.8
PDE1AP54750 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.29■■□□□ 1.8
PDE1AP54750 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDE1AP54750 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.29■■□□□ 1.8
PDE1AP54750 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE1AP54750 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.28■■□□□ 1.8
PDE1AP54750 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE1AP54750 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.28■■□□□ 1.8
PDE1AP54750 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.28■■□□□ 1.8
PDE1AP54750 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE1AP54750 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE1AP54750 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.28■■□□□ 1.8
PDE1AP54750 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.28■■□□□ 1.8
PDE1AP54750 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.28■■□□□ 1.8
PDE1AP54750 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.28■■□□□ 1.8
PDE1AP54750 AL034346.1-201ENST00000568244 1277 ntBASIC26.28■■□□□ 1.8
PDE1AP54750 AC005837.3-201ENST00000612163 286 ntBASIC26.28■■□□□ 1.8
PDE1AP54750 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE1AP54750 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE1AP54750 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE1AP54750 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.28■■□□□ 1.8
PDE1AP54750 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE1AP54750 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.28■■□□□ 1.8
PDE1AP54750 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PDE1AP54750 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE1AP54750 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.27■■□□□ 1.8
PDE1AP54750 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.27■■□□□ 1.8
PDE1AP54750 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.27■■□□□ 1.8
PDE1AP54750 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE1AP54750 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDE1AP54750 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PDE1AP54750 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.26■■□□□ 1.79
PDE1AP54750 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDE1AP54750 MIR572-201ENST00000384983 95 ntBASIC26.26■■□□□ 1.79
PDE1AP54750 MIR638-201ENST00000385237 100 ntBASIC26.26■■□□□ 1.79
PDE1AP54750 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.26■■□□□ 1.79
PDE1AP54750 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.26■■□□□ 1.79
PDE1AP54750 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PDE1AP54750 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.25■■□□□ 1.79
PDE1AP54750 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDE1AP54750 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.25■■□□□ 1.79
PDE1AP54750 AC142381.2-201ENST00000566120 298 ntBASIC26.25■■□□□ 1.79
PDE1AP54750 AC105233.4-201ENST00000642045 216 ntBASIC26.25■■□□□ 1.79
PDE1AP54750 AC244015.2-201ENST00000616358 1861 ntBASIC26.25■■□□□ 1.79
PDE1AP54750 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDE1AP54750 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDE1AP54750 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDE1AP54750 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDE1AP54750 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms