Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
Pdx1P52946 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
Pdx1P52946 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pdx1P52946 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.76■□□□□ 0.59
Pdx1P52946 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdx1P52946 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.75■□□□□ 0.59
Pdx1P52946 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.75■□□□□ 0.59
Pdx1P52946 Gm13234-201ENSMUST00000120010 747 ntBASIC18.75■□□□□ 0.59
Pdx1P52946 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.75■□□□□ 0.59
Pdx1P52946 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pdx1P52946 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.75■□□□□ 0.59
Pdx1P52946 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdx1P52946 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Pdx1P52946 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pdx1P52946 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdx1P52946 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pdx1P52946 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdx1P52946 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdx1P52946 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdx1P52946 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.73■□□□□ 0.59
Pdx1P52946 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdx1P52946 Gm42778-201ENSMUST00000199644 553 ntBASIC18.73■□□□□ 0.59
Pdx1P52946 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.73■□□□□ 0.59
Pdx1P52946 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.73■□□□□ 0.59
Pdx1P52946 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdx1P52946 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdx1P52946 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdx1P52946 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdx1P52946 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.72■□□□□ 0.59
Pdx1P52946 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
Pdx1P52946 Gm42642-201ENSMUST00000200683 355 ntBASIC18.72■□□□□ 0.59
Pdx1P52946 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdx1P52946 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdx1P52946 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdx1P52946 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdx1P52946 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pdx1P52946 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 Gm13146-201ENSMUST00000118508 780 ntBASIC18.71■□□□□ 0.59
Pdx1P52946 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.71■□□□□ 0.59
Pdx1P52946 Gm10033-202ENSMUST00000211874 928 ntBASIC18.71■□□□□ 0.59
Pdx1P52946 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pdx1P52946 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdx1P52946 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pdx1P52946 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pdx1P52946 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.7■□□□□ 0.58
Pdx1P52946 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.7■□□□□ 0.58
Pdx1P52946 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pdx1P52946 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Pdx1P52946 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdx1P52946 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pdx1P52946 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pdx1P52946 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdx1P52946 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdx1P52946 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms