Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS3P49746 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.69■□□□□ 0.42
THBS3P49746 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS3P49746 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS3P49746 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.69■□□□□ 0.42
THBS3P49746 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.69■□□□□ 0.42
THBS3P49746 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.69■□□□□ 0.42
THBS3P49746 AC099791.2-201ENST00000605725 427 ntBASIC17.69■□□□□ 0.42
THBS3P49746 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.69■□□□□ 0.42
THBS3P49746 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.69■□□□□ 0.42
THBS3P49746 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS3P49746 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS3P49746 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS3P49746 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
THBS3P49746 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS3P49746 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS3P49746 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.68■□□□□ 0.42
THBS3P49746 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THBS3P49746 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
THBS3P49746 AC006455.2-201ENST00000429931 906 ntBASIC17.68■□□□□ 0.42
THBS3P49746 SRD5A1P1-201ENST00000442297 786 ntBASIC17.68■□□□□ 0.42
THBS3P49746 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.68■□□□□ 0.42
THBS3P49746 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.68■□□□□ 0.42
THBS3P49746 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.68■□□□□ 0.42
THBS3P49746 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS3P49746 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
THBS3P49746 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.68■□□□□ 0.42
THBS3P49746 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS3P49746 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS3P49746 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.67■□□□□ 0.42
THBS3P49746 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.67■□□□□ 0.42
THBS3P49746 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.67■□□□□ 0.42
THBS3P49746 AC133561.4-201ENST00000566112 224 ntBASIC17.67■□□□□ 0.42
THBS3P49746 AL031602.1-201ENST00000633169 911 ntBASIC17.67■□□□□ 0.42
THBS3P49746 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
THBS3P49746 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS3P49746 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.66■□□□□ 0.42
THBS3P49746 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 AC005837.3-201ENST00000612163 286 ntBASIC17.66■□□□□ 0.42
THBS3P49746 AC068587.7-201ENST00000641602 218 ntBASIC17.66■□□□□ 0.42
THBS3P49746 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.66■□□□□ 0.42
THBS3P49746 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
THBS3P49746 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THBS3P49746 FBXW4P1-201ENST00000426721 2239 ntBASIC17.66■□□□□ 0.42
THBS3P49746 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.65■□□□□ 0.42
THBS3P49746 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
THBS3P49746 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
THBS3P49746 AC007375.3-201ENST00000600936 2314 ntBASIC17.65■□□□□ 0.42
THBS3P49746 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 MIR935-201ENST00000401179 91 ntBASIC17.65■□□□□ 0.42
THBS3P49746 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.65■□□□□ 0.42
THBS3P49746 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.65■□□□□ 0.42
THBS3P49746 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.65■□□□□ 0.42
THBS3P49746 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.65■□□□□ 0.42
THBS3P49746 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
THBS3P49746 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.65■□□□□ 0.42
THBS3P49746 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.64■□□□□ 0.42
THBS3P49746 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.64■□□□□ 0.42
THBS3P49746 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
THBS3P49746 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
THBS3P49746 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
THBS3P49746 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
THBS3P49746 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.64■□□□□ 0.41
THBS3P49746 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
THBS3P49746 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
THBS3P49746 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
THBS3P49746 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
THBS3P49746 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
THBS3P49746 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.64■□□□□ 0.41
THBS3P49746 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.63■□□□□ 0.41
THBS3P49746 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
THBS3P49746 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS3P49746 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS3P49746 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms