Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 RPS29BYDL061C 171 nt3.48□□□□□ -1.85
MRPL40P36534 MCM21YDR318W 1107 nt3.48□□□□□ -1.85
MRPL40P36534 TLG1YDR468C 675 nt3.48□□□□□ -1.85
MRPL40P36534 RIM11YMR139W 1113 nt3.48□□□□□ -1.85
MRPL40P36534 RFC3YNL290W 1023 nt3.48□□□□□ -1.85
MRPL40P36534 TIR2YOR010C 756 nt3.48□□□□□ -1.85
MRPL40P36534 YOR073W-AYOR073W-A 234 nt3.48□□□□□ -1.85
MRPL40P36534 MRPL37YBR268W 318 nt3.48□□□□□ -1.85
MRPL40P36534 TCP1YDR212W 1680 nt3.48□□□□□ -1.85
MRPL40P36534 ALG8YOR067C 1734 nt3.47□□□□□ -1.85
MRPL40P36534 PST1YDR055W 1335 nt3.47□□□□□ -1.85
MRPL40P36534 YPL109CYPL109C 1974 nt3.47□□□□□ -1.85
MRPL40P36534 YHR202WYHR202W 1809 nt3.47□□□□□ -1.85
MRPL40P36534 RRP8YDR083W 1179 nt3.47□□□□□ -1.85
MRPL40P36534 RRP17YDR412W 708 nt3.47□□□□□ -1.85
MRPL40P36534 SCL1YGL011C 759 nt3.47□□□□□ -1.85
MRPL40P36534 YGL041W-AYGL041W-A 465 nt3.47□□□□□ -1.85
MRPL40P36534 USE1YGL098W 738 nt3.47□□□□□ -1.85
MRPL40P36534 MED11YMR112C 396 nt3.47□□□□□ -1.85
MRPL40P36534 YBL094CYBL094C 333 nt3.47□□□□□ -1.85
MRPL40P36534 YOR082CYOR082C 342 nt3.47□□□□□ -1.85
MRPL40P36534 DGA1YOR245C 1257 nt3.47□□□□□ -1.85
MRPL40P36534 KXD1YGL079W 657 nt3.46□□□□□ -1.86
MRPL40P36534 LIF1YGL090W 1266 nt3.46□□□□□ -1.86
MRPL40P36534 MRPS35YGR165W 1038 nt3.46□□□□□ -1.86
MRPL40P36534 DLS1YJL065C 504 nt3.46□□□□□ -1.86
MRPL40P36534 YAL064W-BYAL064W-B 381 nt3.46□□□□□ -1.86
MRPL40P36534 IRC25YLR021W 540 nt3.46□□□□□ -1.86
MRPL40P36534 RLP7YNL002C 969 nt3.46□□□□□ -1.86
MRPL40P36534 OCA2YNL056W 594 nt3.46□□□□□ -1.86
MRPL40P36534 PEX11YOL147C 711 nt3.46□□□□□ -1.86
MRPL40P36534 CYC2YOR037W 1101 nt3.46□□□□□ -1.86
MRPL40P36534 ARG2YJL071W 1725 nt3.46□□□□□ -1.86
MRPL40P36534 SIN4YNL236W 2925 nt3.45□□□□□ -1.86
MRPL40P36534 DOA4YDR069C 2781 nt3.45□□□□□ -1.86
MRPL40P36534 CLB3YDL155W 1284 nt3.45□□□□□ -1.86
MRPL40P36534 NSE3YDR288W 912 nt3.45□□□□□ -1.86
MRPL40P36534 TAM41YGR046W 1158 nt3.45□□□□□ -1.86
MRPL40P36534 PCD1YLR151C 1023 nt3.45□□□□□ -1.86
MRPL40P36534 PBA1YLR199C 831 nt3.45□□□□□ -1.86
MRPL40P36534 RPL13BYMR142C 600 nt3.45□□□□□ -1.86
MRPL40P36534 MRPS17YMR188C 714 nt3.45□□□□□ -1.86
MRPL40P36534 ACK1YDL203C 1872 nt3.45□□□□□ -1.86
MRPL40P36534 KTR6YPL053C 1341 nt3.44□□□□□ -1.86
MRPL40P36534 FLO5YHR211W 3228 nt3.44□□□□□ -1.86
MRPL40P36534 RRP5YMR229C 5190 nt3.44□□□□□ -1.86
MRPL40P36534 ACA1YER045C 1470 nt3.44□□□□□ -1.86
MRPL40P36534 YDL162CYDL162C 357 nt3.44□□□□□ -1.86
MRPL40P36534 MRPL11YDL202W 750 nt3.44□□□□□ -1.86
MRPL40P36534 DUO1YGL061C 744 nt3.44□□□□□ -1.86
MRPL40P36534 AML1YGR001C 747 nt3.44□□□□□ -1.86
MRPL40P36534 ANB1YJR047C 474 nt3.44□□□□□ -1.86
MRPL40P36534 YMR122W-AYMR122W-A 255 nt3.44□□□□□ -1.86
MRPL40P36534 YOR238WYOR238W 912 nt3.44□□□□□ -1.86
MRPL40P36534 YBR053CYBR053C 1077 nt3.44□□□□□ -1.86
MRPL40P36534 YPL168WYPL168W 1293 nt3.44□□□□□ -1.86
MRPL40P36534 BMS1YPL217C 3552 nt3.44□□□□□ -1.86
MRPL40P36534 BCS1YDR375C 1371 nt3.43□□□□□ -1.86
MRPL40P36534 TRM12YML005W 1389 nt3.43□□□□□ -1.86
MRPL40P36534 ATP25YMR098C 1839 nt3.43□□□□□ -1.86
MRPL40P36534 REX3YLR107W 1215 nt3.43□□□□□ -1.86
MRPL40P36534 HUB1YNR032C-A 222 nt3.43□□□□□ -1.86
MRPL40P36534 DAN4YJR151C 3486 nt3.43□□□□□ -1.86
MRPL40P36534 YDL242WYDL242W 354 nt3.42□□□□□ -1.86
MRPL40P36534 TGL2YDR058C 981 nt3.42□□□□□ -1.86
MRPL40P36534 YDR355CYDR355C 303 nt3.42□□□□□ -1.86
MRPL40P36534 YHP1YDR451C 1062 nt3.42□□□□□ -1.86
MRPL40P36534 OSH3YHR073W 2991 nt3.42□□□□□ -1.86
MRPL40P36534 YOR263CYOR263C 408 nt3.42□□□□□ -1.86
MRPL40P36534 PNT1YOR266W 1272 nt3.42□□□□□ -1.86
MRPL40P36534 CAF20YOR276W 486 nt3.42□□□□□ -1.86
MRPL40P36534 RPS9BYBR189W 588 nt3.42□□□□□ -1.86
MRPL40P36534 DBP5YOR046C 1449 nt3.42□□□□□ -1.86
MRPL40P36534 YNR063WYNR063W 1824 nt3.42□□□□□ -1.86
MRPL40P36534 FRE4YNR060W 2160 nt3.41□□□□□ -1.86
MRPL40P36534 snR63snR63 255 nt3.41□□□□□ -1.86
MRPL40P36534 PEX10YDR265W 1014 nt3.41□□□□□ -1.86
MRPL40P36534 YDR340WYDR340W 303 nt3.41□□□□□ -1.86
MRPL40P36534 RPS8BYER102W 603 nt3.41□□□□□ -1.86
MRPL40P36534 tK(UUU)DtK(UUU)D 73 nt3.41□□□□□ -1.86
MRPL40P36534 tK(UUU)G1tK(UUU)G1 73 nt3.41□□□□□ -1.86
MRPL40P36534 tK(UUU)G2tK(UUU)G2 73 nt3.41□□□□□ -1.86
MRPL40P36534 tK(UUU)KtK(UUU)K 73 nt3.41□□□□□ -1.86
MRPL40P36534 tK(UUU)LtK(UUU)L 73 nt3.41□□□□□ -1.86
MRPL40P36534 tK(UUU)OtK(UUU)O 73 nt3.41□□□□□ -1.86
MRPL40P36534 tK(UUU)PtK(UUU)P 73 nt3.41□□□□□ -1.86
MRPL40P36534 RPC17YJL011C 486 nt3.41□□□□□ -1.86
MRPL40P36534 YAL069WYAL069W 315 nt3.41□□□□□ -1.86
MRPL40P36534 SPC24YMR117C 642 nt3.41□□□□□ -1.86
MRPL40P36534 RPS8AYBL072C 603 nt3.41□□□□□ -1.86
MRPL40P36534 RAS1YOR101W 930 nt3.41□□□□□ -1.86
MRPL40P36534 ENA5YDR038C 3276 nt3.41□□□□□ -1.86
MRPL40P36534 YLR446WYLR446W 1302 nt3.41□□□□□ -1.86
MRPL40P36534 TAF1YGR274C 3201 nt3.4□□□□□ -1.86
MRPL40P36534 OPI6YDL096C 327 nt3.4□□□□□ -1.87
MRPL40P36534 LST7YGR057C 729 nt3.4□□□□□ -1.87
MRPL40P36534 YLR444CYLR444C 303 nt3.4□□□□□ -1.87
MRPL40P36534 YBL065WYBL065W 345 nt3.4□□□□□ -1.87
MRPL40P36534 HRT1YOL133W 366 nt3.4□□□□□ -1.87
MRPL40P36534 YBR089WYBR089W 600 nt3.4□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms