Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 LINC02228-203ENST00000641970 1355 ntBASIC19.81■□□□□ 0.76
ABCD3P28288 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCD3P28288 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ABCD3P28288 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCD3P28288 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCD3P28288 AC026271.2-201ENST00000428091 497 ntBASIC19.8■□□□□ 0.76
ABCD3P28288 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCD3P28288 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCD3P28288 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.8■□□□□ 0.76
ABCD3P28288 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCD3P28288 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.8■□□□□ 0.76
ABCD3P28288 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCD3P28288 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCD3P28288 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCD3P28288 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ABCD3P28288 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 AC005224.4-201ENST00000583262 1652 ntBASIC19.79■□□□□ 0.76
ABCD3P28288 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 AC079834.2-201ENST00000609776 1949 ntBASIC19.79■□□□□ 0.76
ABCD3P28288 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ABCD3P28288 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.79■□□□□ 0.76
ABCD3P28288 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCD3P28288 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ABCD3P28288 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ABCD3P28288 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCD3P28288 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ABCD3P28288 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ABCD3P28288 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.78■□□□□ 0.76
ABCD3P28288 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCD3P28288 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCD3P28288 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCD3P28288 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ABCD3P28288 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.78■□□□□ 0.76
ABCD3P28288 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCD3P28288 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.78■□□□□ 0.76
ABCD3P28288 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ABCD3P28288 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ABCD3P28288 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCD3P28288 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCD3P28288 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.77■□□□□ 0.76
ABCD3P28288 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ABCD3P28288 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ABCD3P28288 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.77■□□□□ 0.76
ABCD3P28288 AC087623.3-201ENST00000607047 1098 ntBASIC19.77■□□□□ 0.76
ABCD3P28288 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ABCD3P28288 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ABCD3P28288 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ABCD3P28288 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.77■□□□□ 0.76
ABCD3P28288 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ABCD3P28288 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ABCD3P28288 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ABCD3P28288 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ABCD3P28288 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.76■□□□□ 0.75
ABCD3P28288 CCDC92B-201ENST00000575506 885 ntBASIC19.76■□□□□ 0.75
ABCD3P28288 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.76■□□□□ 0.75
ABCD3P28288 TERF1P2-201ENST00000583350 1212 ntBASIC19.76■□□□□ 0.75
ABCD3P28288 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.76■□□□□ 0.75
ABCD3P28288 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.76■□□□□ 0.75
ABCD3P28288 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCD3P28288 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ABCD3P28288 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
ABCD3P28288 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.75■□□□□ 0.75
ABCD3P28288 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ABCD3P28288 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ABCD3P28288 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms