Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YLR154W-BYLR154W-B 165 nt4.25□□□□□ -1.73
MSH1P25846 YBL010CYBL010C 843 nt4.25□□□□□ -1.73
MSH1P25846 YMR158C-AYMR158C-A 138 nt4.25□□□□□ -1.73
MSH1P25846 SSO2YMR183C 888 nt4.25□□□□□ -1.73
MSH1P25846 YNL181WYNL181W 1224 nt4.25□□□□□ -1.73
MSH1P25846 RPS10AYOR293W 318 nt4.25□□□□□ -1.73
MSH1P25846 FIG1YBR040W 897 nt4.25□□□□□ -1.73
MSH1P25846 UBP12YJL197W 3765 nt4.25□□□□□ -1.73
MSH1P25846 SPT14YPL175W 1359 nt4.25□□□□□ -1.73
MSH1P25846 HCA4YJL033W 2313 nt4.24□□□□□ -1.73
MSH1P25846 ATP16YDL004W 483 nt4.24□□□□□ -1.73
MSH1P25846 LSM4YER112W 564 nt4.24□□□□□ -1.73
MSH1P25846 IES3YLR052W 753 nt4.24□□□□□ -1.73
MSH1P25846 SFH1YLR321C 1281 nt4.24□□□□□ -1.73
MSH1P25846 YNL320WYNL320W 855 nt4.24□□□□□ -1.73
MSH1P25846 PIN3YPR154W 648 nt4.24□□□□□ -1.73
MSH1P25846 FOX2YKR009C 2703 nt4.24□□□□□ -1.73
MSH1P25846 AIM21YIR003W 2040 nt4.24□□□□□ -1.73
MSH1P25846 FRT2YAL028W 1587 nt4.23□□□□□ -1.73
MSH1P25846 YDR526CYDR526C 471 nt4.23□□□□□ -1.73
MSH1P25846 YEL010WYEL010W 351 nt4.23□□□□□ -1.73
MSH1P25846 YGL041W-AYGL041W-A 465 nt4.23□□□□□ -1.73
MSH1P25846 TDA10YGR205W 873 nt4.23□□□□□ -1.73
MSH1P25846 YIL014C-AYIL014C-A 315 nt4.23□□□□□ -1.73
MSH1P25846 PAM18YLR008C 507 nt4.23□□□□□ -1.73
MSH1P25846 YLR347W-AYLR347W-A 141 nt4.23□□□□□ -1.73
MSH1P25846 YBL068W-AYBL068W-A 237 nt4.23□□□□□ -1.73
MSH1P25846 VPS45YGL095C 1734 nt4.23□□□□□ -1.73
MSH1P25846 GCR1YPL075W 2358 nt4.22□□□□□ -1.73
MSH1P25846 TRM11YOL124C 1302 nt4.22□□□□□ -1.73
MSH1P25846 YOR022CYOR022C 2148 nt4.22□□□□□ -1.73
MSH1P25846 ACK1YDL203C 1872 nt4.22□□□□□ -1.73
MSH1P25846 ULP1YPL020C 1866 nt4.22□□□□□ -1.73
MSH1P25846 MTR4YJL050W 3222 nt4.22□□□□□ -1.73
MSH1P25846 MNT4YNR059W 1743 nt4.22□□□□□ -1.73
MSH1P25846 RPS25AYGR027C 327 nt4.22□□□□□ -1.73
MSH1P25846 EFB1YAL003W 621 nt4.22□□□□□ -1.73
MSH1P25846 FMP46YKR049C 402 nt4.22□□□□□ -1.73
MSH1P25846 SNT1YCR033W 3681 nt4.22□□□□□ -1.73
MSH1P25846 PHM7YOL084W 2976 nt4.22□□□□□ -1.73
MSH1P25846 ARP9YMR033W 1404 nt4.21□□□□□ -1.73
MSH1P25846 GDH2YDL215C 3279 nt4.21□□□□□ -1.74
MSH1P25846 MTR10YOR160W 2919 nt4.21□□□□□ -1.74
MSH1P25846 YGL088WYGL088W 366 nt4.21□□□□□ -1.74
MSH1P25846 TAN1YGL232W 870 nt4.21□□□□□ -1.74
MSH1P25846 YIL024CYIL024C 570 nt4.21□□□□□ -1.74
MSH1P25846 MRPL49YJL096W 486 nt4.21□□□□□ -1.74
MSH1P25846 YJR038CYJR038C 363 nt4.21□□□□□ -1.74
MSH1P25846 END3YNL084C 1050 nt4.21□□□□□ -1.74
MSH1P25846 NRK1YNL129W 723 nt4.21□□□□□ -1.74
MSH1P25846 YNL303WYNL303W 348 nt4.21□□□□□ -1.74
MSH1P25846 PEX27YOR193W 1131 nt4.21□□□□□ -1.74
MSH1P25846 GRX5YPL059W 453 nt4.21□□□□□ -1.74
MSH1P25846 BCS1YDR375C 1371 nt4.21□□□□□ -1.74
MSH1P25846 RAD26YJR035W 3258 nt4.21□□□□□ -1.74
MSH1P25846 DSE1YER124C 1722 nt4.21□□□□□ -1.74
MSH1P25846 SSU1YPL092W 1377 nt4.2□□□□□ -1.74
MSH1P25846 CDC12YHR107C 1224 nt4.2□□□□□ -1.74
MSH1P25846 AIM22YJL046W 1230 nt4.2□□□□□ -1.74
MSH1P25846 ERG20YJL167W 1059 nt4.2□□□□□ -1.74
MSH1P25846 YJR112W-AYJR112W-A 330 nt4.2□□□□□ -1.74
MSH1P25846 SMD2YLR275W 333 nt4.2□□□□□ -1.74
MSH1P25846 SRT1YMR101C 1032 nt4.2□□□□□ -1.74
MSH1P25846 MOH1YBL049W 417 nt4.2□□□□□ -1.74
MSH1P25846 DDP1YOR163W 567 nt4.2□□□□□ -1.74
MSH1P25846 MON1YGL124C 1935 nt4.2□□□□□ -1.74
MSH1P25846 AZR1YGR224W 1842 nt4.2□□□□□ -1.74
MSH1P25846 FAS2YPL231W 5664 nt4.2□□□□□ -1.74
MSH1P25846 RPO31YOR116C 4383 nt4.19□□□□□ -1.74
MSH1P25846 GYP6YJL044C 1377 nt4.19□□□□□ -1.74
MSH1P25846 YER034WYER034W 558 nt4.19□□□□□ -1.74
MSH1P25846 tL(UAG)JtL(UAG)J 82 nt4.19□□□□□ -1.74
MSH1P25846 tL(UAG)L1tL(UAG)L1 82 nt4.19□□□□□ -1.74
MSH1P25846 tL(UAG)L2tL(UAG)L2 82 nt4.19□□□□□ -1.74
MSH1P25846 SPO11YHL022C 1197 nt4.19□□□□□ -1.74
MSH1P25846 COX6YHR051W 447 nt4.19□□□□□ -1.74
MSH1P25846 RPS4BYHR203C 786 nt4.19□□□□□ -1.74
MSH1P25846 GLG2YJL137C 1143 nt4.19□□□□□ -1.74
MSH1P25846 MAK16YAL025C 921 nt4.19□□□□□ -1.74
MSH1P25846 RPS4AYJR145C 786 nt4.19□□□□□ -1.74
MSH1P25846 RDN58-1RDN58-1 158 nt4.19□□□□□ -1.74
MSH1P25846 RDN58-2RDN58-2 158 nt4.19□□□□□ -1.74
MSH1P25846 GLO1YML004C 981 nt4.19□□□□□ -1.74
MSH1P25846 YOR082CYOR082C 342 nt4.19□□□□□ -1.74
MSH1P25846 OSW1YOR255W 837 nt4.19□□□□□ -1.74
MSH1P25846 DIM1YPL266W 957 nt4.19□□□□□ -1.74
MSH1P25846 FRM2YCL026C-A 582 nt4.19□□□□□ -1.74
MSH1P25846 GEM1YAL048C 1989 nt4.19□□□□□ -1.74
MSH1P25846 RDS2YPL133C 1341 nt4.19□□□□□ -1.74
MSH1P25846 ISW2YOR304W 3363 nt4.19□□□□□ -1.74
MSH1P25846 PRP31YGR091W 1485 nt4.18□□□□□ -1.74
MSH1P25846 GCD1YOR260W 1737 nt4.18□□□□□ -1.74
MSH1P25846 APE2YKL157W 2859 nt4.18□□□□□ -1.74
MSH1P25846 YOL075CYOL075C 3885 nt4.18□□□□□ -1.74
MSH1P25846 TAF8YML114C 1533 nt4.18□□□□□ -1.74
MSH1P25846 RPS18AYDR450W 441 nt4.18□□□□□ -1.74
MSH1P25846 LIP2YLR239C 987 nt4.18□□□□□ -1.74
MSH1P25846 YLR290CYLR290C 834 nt4.18□□□□□ -1.74
MSH1P25846 HUA2YOR284W 732 nt4.18□□□□□ -1.74
MSH1P25846 YOR366WYOR366W 354 nt4.18□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 31.8 ms