Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PEPDP12955 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.81■□□□□ 0.76
PEPDP12955 IGHV3-19-201ENST00000521488 291 ntBASIC19.81■□□□□ 0.76
PEPDP12955 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.81■□□□□ 0.76
PEPDP12955 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PEPDP12955 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.81■□□□□ 0.76
PEPDP12955 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PEPDP12955 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEPDP12955 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.81■□□□□ 0.76
PEPDP12955 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.81■□□□□ 0.76
PEPDP12955 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEPDP12955 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEPDP12955 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEPDP12955 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.81■□□□□ 0.76
PEPDP12955 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 TSPY26P-201ENST00000476365 1326 ntBASIC19.8■□□□□ 0.76
PEPDP12955 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.8■□□□□ 0.76
PEPDP12955 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PEPDP12955 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.8■□□□□ 0.76
PEPDP12955 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.8■□□□□ 0.76
PEPDP12955 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.8■□□□□ 0.76
PEPDP12955 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEPDP12955 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PEPDP12955 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PEPDP12955 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.79■□□□□ 0.76
PEPDP12955 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.79■□□□□ 0.76
PEPDP12955 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.79■□□□□ 0.76
PEPDP12955 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.79■□□□□ 0.76
PEPDP12955 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.79■□□□□ 0.76
PEPDP12955 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEPDP12955 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
PEPDP12955 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.78■□□□□ 0.76
PEPDP12955 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.78■□□□□ 0.76
PEPDP12955 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.78■□□□□ 0.76
PEPDP12955 AC087239.1-201ENST00000622671 572 ntBASIC19.78■□□□□ 0.76
PEPDP12955 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PEPDP12955 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.78■□□□□ 0.76
PEPDP12955 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PEPDP12955 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.77■□□□□ 0.76
PEPDP12955 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEPDP12955 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEPDP12955 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.77■□□□□ 0.76
PEPDP12955 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEPDP12955 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEPDP12955 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PEPDP12955 MIR935-201ENST00000401179 91 ntBASIC19.77■□□□□ 0.76
PEPDP12955 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.77■□□□□ 0.76
PEPDP12955 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.77■□□□□ 0.76
PEPDP12955 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEPDP12955 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PEPDP12955 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
PEPDP12955 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PEPDP12955 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.76■□□□□ 0.75
PEPDP12955 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEPDP12955 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEPDP12955 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.76■□□□□ 0.75
PEPDP12955 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.76■□□□□ 0.75
PEPDP12955 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PEPDP12955 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEPDP12955 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PEPDP12955 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.76■□□□□ 0.75
PEPDP12955 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PEPDP12955 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.76■□□□□ 0.75
PEPDP12955 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.75■□□□□ 0.75
PEPDP12955 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEPDP12955 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEPDP12955 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.75■□□□□ 0.75
PEPDP12955 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PEPDP12955 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PEPDP12955 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.75■□□□□ 0.75
PEPDP12955 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PEPDP12955 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PEPDP12955 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms