Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.84□□□□□ -0.19
TcraP01849 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TcraP01849 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TcraP01849 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TcraP01849 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TcraP01849 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TcraP01849 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TcraP01849 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TcraP01849 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.83□□□□□ -0.2
TcraP01849 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TcraP01849 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TcraP01849 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TcraP01849 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TcraP01849 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.82□□□□□ -0.2
TcraP01849 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TcraP01849 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.82□□□□□ -0.2
TcraP01849 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.82□□□□□ -0.2
TcraP01849 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.82□□□□□ -0.2
TcraP01849 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.82□□□□□ -0.2
TcraP01849 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.82□□□□□ -0.2
TcraP01849 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.82□□□□□ -0.2
TcraP01849 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TcraP01849 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TcraP01849 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TcraP01849 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TcraP01849 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.81□□□□□ -0.2
TcraP01849 Gm43566-201ENSMUST00000196851 808 ntBASIC13.81□□□□□ -0.2
TcraP01849 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.81□□□□□ -0.2
TcraP01849 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TcraP01849 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TcraP01849 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TcraP01849 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 BC021767-201ENSMUST00000126387 1716 ntBASIC13.8□□□□□ -0.2
TcraP01849 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TcraP01849 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TcraP01849 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.79□□□□□ -0.2
TcraP01849 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.79□□□□□ -0.2
TcraP01849 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms