Protein–RNA interactions for Protein: O55144

Tlx3, T-cell leukemia homeobox protein 3, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlx3O55144 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
Tlx3O55144 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.21■□□□□ 0.51
Tlx3O55144 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tlx3O55144 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tlx3O55144 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.21■□□□□ 0.51
Tlx3O55144 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tlx3O55144 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tlx3O55144 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tlx3O55144 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.2■□□□□ 0.5
Tlx3O55144 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tlx3O55144 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tlx3O55144 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tlx3O55144 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.2■□□□□ 0.5
Tlx3O55144 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Tlx3O55144 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tlx3O55144 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tlx3O55144 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tlx3O55144 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tlx3O55144 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tlx3O55144 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.2■□□□□ 0.5
Tlx3O55144 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tlx3O55144 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tlx3O55144 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tlx3O55144 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.19■□□□□ 0.5
Tlx3O55144 Gm10698-201ENSMUST00000182663 604 ntBASIC18.19■□□□□ 0.5
Tlx3O55144 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.19■□□□□ 0.5
Tlx3O55144 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tlx3O55144 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tlx3O55144 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.19■□□□□ 0.5
Tlx3O55144 Dio3-201ENSMUST00000097228 1449 ntBASIC18.19■□□□□ 0.5
Tlx3O55144 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tlx3O55144 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.19■□□□□ 0.5
Tlx3O55144 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tlx3O55144 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tlx3O55144 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.18■□□□□ 0.5
Tlx3O55144 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tlx3O55144 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Tlx3O55144 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Tlx3O55144 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Tlx3O55144 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tlx3O55144 Gm9987-201ENSMUST00000069768 567 ntBASIC18.18■□□□□ 0.5
Tlx3O55144 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tlx3O55144 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tlx3O55144 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tlx3O55144 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tlx3O55144 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tlx3O55144 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tlx3O55144 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Tlx3O55144 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.17■□□□□ 0.5
Tlx3O55144 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.17■□□□□ 0.5
Tlx3O55144 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Tlx3O55144 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.17■□□□□ 0.5
Tlx3O55144 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.17■□□□□ 0.5
Tlx3O55144 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tlx3O55144 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.17■□□□□ 0.5
Tlx3O55144 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Tlx3O55144 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tlx3O55144 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.16■□□□□ 0.5
Tlx3O55144 Gm7860-201ENSMUST00000121190 879 ntBASIC18.16■□□□□ 0.5
Tlx3O55144 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.16■□□□□ 0.5
Tlx3O55144 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.16■□□□□ 0.5
Tlx3O55144 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.16■□□□□ 0.5
Tlx3O55144 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tlx3O55144 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tlx3O55144 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.15■□□□□ 0.5
Tlx3O55144 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tlx3O55144 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Tlx3O55144 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.15■□□□□ 0.5
Tlx3O55144 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlx3O55144 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms