Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Gm14523-201ENSMUST00000117260 558 ntBASIC14.99□□□□□ -0.01
Pde6dO55057 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pde6dO55057 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pde6dO55057 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pde6dO55057 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.98□□□□□ -0.01
Pde6dO55057 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6dO55057 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pde6dO55057 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 AA386476-201ENSMUST00000098781 1665 ntBASIC14.97□□□□□ -0.01
Pde6dO55057 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.97□□□□□ -0.01
Pde6dO55057 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pde6dO55057 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6dO55057 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pde6dO55057 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.96□□□□□ -0.01
Pde6dO55057 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Pde6dO55057 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pde6dO55057 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.96□□□□□ -0.01
Pde6dO55057 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pde6dO55057 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pde6dO55057 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pde6dO55057 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.95□□□□□ -0.02
Pde6dO55057 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.95□□□□□ -0.02
Pde6dO55057 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pde6dO55057 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pde6dO55057 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pde6dO55057 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.95□□□□□ -0.02
Pde6dO55057 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.95□□□□□ -0.02
Pde6dO55057 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.95□□□□□ -0.02
Pde6dO55057 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pde6dO55057 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pde6dO55057 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Pde6dO55057 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pde6dO55057 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.94□□□□□ -0.02
Pde6dO55057 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pde6dO55057 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pde6dO55057 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pde6dO55057 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pde6dO55057 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms